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BaseInfo

ncRNA ID	novel_zma_miR8325
Species	Zea mays
Class	miRNA
Genome position	Chr1:298107399-298107575 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	158 - CGCUAUCUAUCCUGAGCUCC - 177
Stem-loop(if miRNA)	--         G         CUA   AAACAC     U        -   --GC        --A     --        GA      U   G   AGCUCAGGA GGAUAGCGC   GGA      AUAGA CGGAGCCG GCC    GAGGAGAA   GAAAG  AGCCAAGA  UAUGUG GAU A   ||||||||| |||||||||   |||      ||||| |||||||| |||    ||||||||   |||||  ||||||||  |||||| ||| A   UCGAGUCCU UCUAUCGCG   UCU      UAUCU GUCUUGGU CGG    CUCCUCUU   UUUUC  UCGGUUCU  GUACAU CUA U CC         A         AAG   ---AAC     -        G   AGGU        GUG     GA        AG      -   A
Stem-loop sequence	AGCUCAGGAGGGAUAGCGCCUAGGAAAACACAUAGAUCGGAGCCGGCCGCGAGGAGAAAGAAAGAGCCAAGAGAUAUGUGUGAUGAAUAAUCUACAUGGAUCUUGGCUAGCUUUUGUGUUCUCCUCUGGAGGCGUGGUUCUGUCUAUCAAUCUGAAGCGCUAUCUAUCCUGAGCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163451.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1115 from Patent EP2559767	NA	coding protein	psRNATarget
HI403272.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1397 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235120.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1115 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235402.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1397 from Patent EP2985353	NA	coding protein	psRNATarget
HI402990.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1115 from Patent EP2074227	NA	coding protein	psRNATarget
JB163733.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   |||||||||||||||||||| targets:10   GGAGCUCAGGAUAGAUAGCG   29 Target Full Sequence	0.0	Sequence 1397 from Patent EP2559767	NA	coding protein	psRNATarget
AY111410.1	ncRNA:20   CCUCGAGUCCUAUCUAUCGC   1   *||*=||||||||||||||* targets:618   CGAUUUCAGGAUAGAUAGCU   637 Target Full Sequence	3.0	Zea mays CL56074_1 mRNA sequence	NA	coding protein	psRNATarget