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BaseInfo

ncRNA ID	novel_zma_miR8322
Species	Zea mays
Class	miRNA
Genome position	Chr9:110456453-110456522 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	51 - GAUUGGAGGAGCUAAAAUCC - 70
Stem-loop(if miRNA)	--         A         CC  C    UUCAA   GAUUGGAGG GCUAAAAUC  CU CAUA     U   ||||||||| |||||||||  || ||||   CUAACCUCC CGAUUUUAG  GA GUAU     U AU         C         AU  A    UAAUU
Stem-loop sequence	GAUUGGAGGAGCUAAAAUCCCCUCCAUAUUCAAUUUUAAUUAUGAAGUAGAUUUUAGCCCCUCCAAUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539397.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   ||||||||||*||||||||| targets:3529   GGAUUUUAGCCCCUCCAAUC   3548 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   ||||||||||*||||||||| targets:3494   GGAUUUUAGCCCCUCCAAUC   3513 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
JB163850.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   ||||||||||*||||||||= targets:68   GGAUUUUAGCCCCUCCAAUU   87 Target Full Sequence	2.5	Sequence 1514 from Patent EP2559767	NA	coding protein	psRNATarget
HI403389.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   ||||||||||*||||||||= targets:68   GGAUUUUAGCCCCUCCAAUU   87 Target Full Sequence	2.5	Sequence 1514 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235519.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   ||||||||||*||||||||= targets:68   GGAUUUUAGCCCCUCCAAUU   87 Target Full Sequence	2.5	Sequence 1514 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   |||||*||||*||||||||| targets:4121   GGAUUAUAGCCCCUCCAAUC   4140 Target Full Sequence	2.5	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
EZ074100.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   |||||*||||*||||||||| targets:212   GGAUUCUAGCCCCUCCAAUC   231 Target Full Sequence	2.5	TSA: Zea mays contig09737, mRNA sequence	NA	coding protein	psRNATarget
EU955574.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *||||*|||||||||||*|| targets:87   CGAUUCUAGCUCCUCCACUC   106 Target Full Sequence	2.5	Zea mays clone 1537438 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149469.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *||||*|||||||||||*|| targets:87   CGAUUCUAGCUCCUCCACUC   106 Target Full Sequence	2.5	Zea mays uncharacterized LOC100275382 (LOC100275382), mRNA	NA	coding protein	psRNATarget
JB166405.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4069 from Patent EP2559767	NA	coding protein	psRNATarget
JB166408.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4072 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238074.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4069 from Patent EP2985353	NA	coding protein	psRNATarget
HI405944.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4069 from Patent EP2074227	NA	coding protein	psRNATarget
HI405947.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4072 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238077.1	ncRNA:20   CCUAAAAUCGAGGAGGUUAG   1   *|||||*|*||||||||||| targets:83   AGAUUUAAUCUCCUCCAAUC   102 Target Full Sequence	2.5	Sequence 4072 from Patent EP2985353	NA	coding protein	psRNATarget