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BaseInfo

ncRNA ID novel_zma_miR8321
Species Zea mays
Class miRNA
Genome position Chr9:111791260-111791379 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 19
Mature sequence(if miRNA) 1 - GGCAAGUUGUCCUUGGCUA - 19
Stem-loop(if miRNA) --        UG          UAUUUU A    -     U  CAG   AG  --UA G   U
  GCCAAGGA  ACUUGCCGGG      G GCAU GCAUG UA   GGG  CA    U CAA C
  ||||||||  ||||||||||      | |||| ||||| ||   |||  ||    | ||| U
  CGGUUCCU  UGAACGGCCU      C CGUG CGUGC AU   CCC  GU    A GUU G
AU        GU          -UCUGU -    G     C  --A   GA  UUUA G   U
Stem-loop sequence GCCAAGGAUGACUUGCCGGGUAUUUUGAGCAUGCAUGUUACAGGGGAGCAUAUGCAAUCUGUUUGGAAUUUUGAGCCCAUACCGUGCGGUGCCUGUCUUCCGGCAAGUUGUCCUUGGCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548143.1
ncRNA:19   AUCGGUUCCUGU-UGAACGG   1
  ||||||||||||-|||||||
targets:693   UAGCCAAGGACAGACUUGCC   712

3.0 PREDICTED: Zea mays uncharacterized LOC103648407 (LOC103648407), mRNA NA coding protein psRNATarget
BT060668.2
ncRNA:19   AUCGGUUCCUGU-UGAACGG   1
  ||||||||||||-|||||||
targets:949   UAGCCAAGGACAGACUUGCC   968

3.0 Zea mays full-length cDNA clone ZM_BFb0031E01 mRNA, complete cds NA coding protein psRNATarget