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BaseInfo

ncRNA ID	novel_zma_miR8320
Species	Zea mays
Class	miRNA
Genome position	Chr9:115025572-115025700 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - GUCUAGAAAGAACUAUAUUU - 20
Stem-loop(if miRNA)	----     AU         -   -AAACAUG A     UAG     --C        -UGAUU    U     AUAGU  UCUUUUUAG CCU        C UUCAU   UAAAU   UAAGAAUG      GAUA G     |||||  ||||||||| |||        | |||||   |||||   ||||||||      ||||     UAUCA  AGAAAGAUC GGA        G AGGUG   AUUUA   AUUCUUAC      CUGU U UUUA     --         U   GAAAAAAA C     UAA     CUU        UUAGAU    A
Stem-loop sequence	AUAGUAUUCUUUUUAGCCUAAACAUGCAUUCAUUAGUAAAUCUAAGAAUGUGAUUGAUAUGUAUGUCUAGAUUCAUUCUUAUUCAUUUAAAUGUGGACGAAAAAAAGAGGUCUAGAAAGAACUAUAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041170.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:1383   AAAUAUAGUUCUUUCUAGCC   1402 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0183M02 mRNA, complete cds	NA	coding protein	psRNATarget
BT035488.2	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:1311   AAAUAUAGUUCUUUCUAGCC   1330 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0066A14 mRNA, complete cds	NA	coding protein	psRNATarget
EU960252.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:1285   AAAUAUAGUUCUUUCUAGCC   1304 Target Full Sequence	1.5	Zea mays clone 222898 mRNA sequence	NA	coding protein	psRNATarget
NM_001349831.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:1258   AAAUAUAGUUCUUUCUAGCC   1277 Target Full Sequence	1.5	Zea mays uncharacterized LOC100193265 (LOC100193265), mRNA	NA	coding protein	psRNATarget
XM_020545799.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:739   AAAUAUAGUUCUUUCUAGCC   758 Target Full Sequence	1.5	PREDICTED: Zea mays tRNA-specific adenosine deaminase 1-like (LOC103641570), mRNA	NA	coding protein	psRNATarget
BT068279.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:480   AAAUAUAGUUCUUUCUAGCC   499 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0103N03 mRNA, complete cds	NA	coding protein	psRNATarget
EZ104649.1	ncRNA:20   UUUAUAUCAAGAAAGAUCUG   1   ||||||||||||||||||*| targets:101   AAAUAUAGUUCUUUCUAGCC   120 Target Full Sequence	1.5	TSA: Zea mays contig40306, mRNA sequence	NA	coding protein	psRNATarget