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BaseInfo

ncRNA ID novel_zma_miR8315
Species Zea mays
Class miRNA
Genome position Chr9:145952507-145952560 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 23
Mature sequence(if miRNA) 1 - CGUUCUUGGGGAGCCUAUUGACA - 23
Stem-loop(if miRNA) --       U   A   UC     AAU
  UCGGUGG GCU CUC  GGAUG   U
  ||||||| ||| |||  |||||   U
  AGUUAUC CGA GGG  CUUGC   U
AC       -   G   UU     AAU
Stem-loop sequence UCGGUGGUGCUACUCUCGGAUGAAUUUUUAACGUUCUUGGGGAGCCUAUUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ059372.1
ncRNA:23   ACAGUUAUCCGAGGGGUUCUUGC   1
  |||||||||||||||||||||||
targets:1605   UGUCAAUAGGCUCCCCAAGAACG   1627

0.0 TSA: Zea mays contig60494, mRNA sequence NA coding protein psRNATarget
BT083907.2
ncRNA:23   ACAGUUAUCCGAGGGGUUCUUGC   1
  *|||*|||||||||||||||||*
targets:562   AGUCCAUAGGCUCCCCAAGAACU   584

2.0 Zea mays full-length cDNA clone ZM_BFb0053I18 mRNA, complete cds NA coding protein psRNATarget
BT087174.2
ncRNA:23   ACAGUUAUCCGAGGGGUUCUUGC   1
  *|||*|||||||||||||||||*
targets:562   AGUCCAUAGGCUCCCCAAGAACU   584

2.0 Zea mays full-length cDNA clone ZM_BFb0233G15 mRNA, complete cds NA coding protein psRNATarget