Search result

BaseInfo

ncRNA ID	novel_zma_miR8299
Species	Zea mays
Class	miRNA
Genome position	Chr9:24931122-24931195 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	19
Mature sequence(if miRNA)	1 - GGUGUCCUUUGCCCGAACC - 19
Stem-loop(if miRNA)	--      -    -GC      -  --  UG U   UU C   GGUGUC CUUU   CCGAAC CU  UG  G GGA  C A   |||||| ||||   |||||| ||  ||  | |||  |   CUACAG GAAG   GGCUUG GG  AC  C CCU  G G UU      C    UUA      U  UU  GU -   UU C
Stem-loop sequence	GGUGUCCUUUGCCCGAACCUUGUGGUGGAUUCCAGCGUUUCCCUGCAUUGGUGUUCGGAUUGAAGCGACAUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001301569.1	ncRNA:19   CCAAGCCCGUUUCCUGUGG   1   |||||*||||||||||*|| targets:1296   GGUUCUGGCAAAGGACCCC   1314 Target Full Sequence	2.5	Zea mays cytochrome P450 711A1-like (MAX1b), mRNA	NA	coding protein	psRNATarget
FJ957948.1	ncRNA:19   CCAAGCCCGUUUCCUGUGG   1   |||||*||||||||||*|| targets:1296   GGUUCUGGCAAAGGACCCC   1314 Target Full Sequence	2.5	Zea mays cytochrome P450 monooxygenase (MAX1b) mRNA, complete cds	NA	coding protein	psRNATarget
XM_008675437.2	ncRNA:19   CCAAGCCCGUUUCCUGUGG   1   |||||*||||||||||*|| targets:1188   GGUUCUGGCAAAGGACCCC   1206 Target Full Sequence	2.5	PREDICTED: Zea mays cytochrome P450 711A1-like (MAX1b), transcript variant X1, mRNA	NA	coding protein	psRNATarget