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BaseInfo

ncRNA ID	novel_zma_miR8295
Species	Zea mays
Class	miRNA
Genome position	Chr9:21698042-21698110 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	24
Mature sequence(if miRNA)	46 - GCUUUAGAGGACCUUGUUGGAGGC - 69
Stem-loop(if miRNA)	CUCCACAUUUAGG     UG   -CA       UAAUUUA G              GUCUC  GCA   UCCUCUA       G A              |||||  |||   |||||||       |              CGGAG  UGU   AGGAGAU       C G -------------     GU   UCC       ---UUCG A
Stem-loop sequence	CUCCACAUUUAGGGUCUCUGGCACAUCCUCUAUAAUUUAGGAGACGCUUUAGAGGACCUUGUUGGAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008660954.2	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |=|||||||||||||||||||||| targets:139   GUCUCCAACAAGGUCCUCUAAAGC   162 Target Full Sequence	0.0	PREDICTED: Zea mays Anaphase-promoting complex subunit 4 (LOC103637954), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008660953.2	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |=|||||||||||||||||||||| targets:139   GUCUCCAACAAGGUCCUCUAAAGC   162 Target Full Sequence	0.0	PREDICTED: Zea mays Anaphase-promoting complex subunit 4 (LOC103637954), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU946074.1	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |*||||||||||||||*||||||* targets:1018   GGCUCCAACAAGGUCCCCUAAAGG   1041 Target Full Sequence	2.5	Zea mays clone 295978 mRNA sequence	NA	coding protein	psRNATarget
BT038218.1	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |*||||||||||||||*||||||* targets:1558   GGCUCCAACAAGGUCCCCUAAAGG   1581 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0217P21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143611.1	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |*||||||||||||||*||||||* targets:1558   GGCUCCAACAAGGUCCCCUAAAGG   1581 Target Full Sequence	2.5	Zea mays putative MYB DNA-binding domain superfamily protein (LOC100217256), mRNA	NA	coding protein	psRNATarget
XM_008669174.2	ncRNA:24   CGGAGGUUGUUCCAGGAGAUUUCG   1   |*||||||||||||||*||||||* targets:1586   GGCUCCAACAAGGUCCCCUAAAGG   1609 Target Full Sequence	2.5	PREDICTED: Zea mays putative MYB DNA-binding domain superfamily protein (LOC100217256), transcript variant X1, mRNA	NA	coding protein	psRNATarget