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BaseInfo

ncRNA ID novel_zma_miR8291
Species Zea mays
Class miRNA
Genome position Chr8:162780585-162780696 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 20
Mature sequence(if miRNA) 1 - GAUUCUCCCUGCAAACACUC - 20
Stem-loop(if miRNA) --   CC      U       ------GUU    AA  CCUGCCUAGUUAGCAGGUCUAA
  GUG  UUGCAG GGGAGUC         AGUU  AG                      A
  |||  |||||| |||||||         ||||  ||                      A
  CAC  AACGUC CUCUUAG         CGUU  CG                      C
CU   -A      C       AUGAAUAAA    --  AAUUCUGGAUGAUUGACCUGUU
Stem-loop sequence GUGCCUUGCAGUGGGAGUCGUUAGUUAAAGCCUGCCUAGUUAGCAGGUCUAAAACUUGUCCAGUUAGUAGGUCUUAAGCUUGCAAAUAAGUAGAUUCUCCCUGCAAACACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU958250.1
ncRNA:20   CUCACAAACGUCCCUCUUAG   1
  *||*|||||||||*||||||
targets:768   AAGGGUUUGCAGGCAGAAUC   787

2.5 Zea mays clone 1680868 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001149818.1
ncRNA:20   CUCACAAACGUCCCUCUUAG   1
  *||*|||||||||*||||||
targets:768   AAGGGUUUGCAGGCAGAAUC   787

2.5 Zea mays uncharacterized LOC100275824 (LOC100275824), mRNA NA coding protein psRNATarget