ncRNA ID | novel_zma_miR8291 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:162780585-162780696 [-] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GAUUCUCCCUGCAAACACUC - 20 |
Stem-loop(if miRNA) |
--   CC      U       ------GUU    AA  CCUGCCUAGUUAGCAGGUCUAA   GUG  UUGCAG GGGAGUC         AGUU  AG                      A   |||  |||||| |||||||         ||||  ||                      A   CAC  AACGUC CUCUUAG         CGUU  CG                      C CU   -A      C       AUGAAUAAA    --  AAUUCUGGAUGAUUGACCUGUU |
Stem-loop sequence | GUGCCUUGCAGUGGGAGUCGUUAGUUAAAGCCUGCCUAGUUAGCAGGUCUAAAACUUGUCCAGUUAGUAGGUCUUAAGCUUGCAAAUAAGUAGAUUCUCCCUGCAAACACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU958250.1 |
|
2.5 | Zea mays clone 1680868 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001149818.1 |
|
2.5 | Zea mays uncharacterized LOC100275824 (LOC100275824), mRNA | NA | coding protein | psRNATarget |