ncRNA ID | novel_zma_miR8285 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:179197172-179197266 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 20 |
Mature sequence(if miRNA) | 76 - UGAUUUUUCCUAGAAGAUUC - 95 |
Stem-loop(if miRNA) |
--       CU    U      ------U         -C    ---U    U   AUCUUUU  GAAA AAUCAU       ACUUCAGGU  CAGU    GUUU U   |||||||  |||| ||||||       |||||||||  ||||    ||||   UAGAAGA  CUUU UUAGUA       UGAAGUUCG  GUCA    CGAG U CU       UC    -      CAAUUUU         UC    UCUU    C |
Stem-loop sequence | AUCUUUUCUGAAAUAAUCAUUACUUCAGGUCCAGUUGUUUUUUCGAGCUUCUACUGCUGCUUGAAGUUUUUAACAUGAUUUUUCCUAGAAGAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ051360.1 |
|
2.5 | TSA: Zea mays contig52480, mRNA sequence | NA | coding protein | psRNATarget |