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BaseInfo

ncRNA ID	novel_zma_miR8283
Species	Zea mays
Class	miRNA
Genome position	Chr8:163837041-163837083 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - GCAGCUGCUGCGUCGGUGGC - 20
Stem-loop(if miRNA)	--   G       G      G   GCA CUGCUGC UCGGUG C   ||| ||||||| |||||| A   CGU GACGACG AGCCGC G AC   G       A      U
Stem-loop sequence	GCAGCUGCUGCGUCGGUGGCAGUCGCCGAAGCAGCAGGUGCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681012.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||||* targets:1286   GCCGCCGACGCAGCAGCUGA   1305 Target Full Sequence	2.0	PREDICTED: Zea mays RING-H2 finger protein ATL13 (LOC103654184), mRNA	NA	coding protein	psRNATarget
NM_001175828.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||||||||||||||||*|| targets:2011   GCCACCGACGCAGCAGCAGC   2030 Target Full Sequence	1.5	Zea mays protein binding protein (LOC100281465), mRNA	NA	coding protein	psRNATarget
BT066431.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||||||||||||||||*|| targets:2011   GCCACCGACGCAGCAGCAGC   2030 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0124I13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154383.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||||||||||||||||*|| targets:2188   GCCACCGACGCAGCAGCAGC   2207 Target Full Sequence	1.5	Zea mays protein binding protein (LOC100281465), mRNA	NA	coding protein	psRNATarget
EZ057276.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:189   GCCGCCGACGCAGCAGCAGC   208 Target Full Sequence	2.5	TSA: Zea mays contig58398, mRNA sequence	NA	coding protein	psRNATarget
EZ106325.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||*|||||||||||| targets:555   GCCGCCGCCGCAGCAGCUGC   574 Target Full Sequence	2.5	TSA: Zea mays contig41983, mRNA sequence	NA	coding protein	psRNATarget
BT083831.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:800   GCCGCCGACGCAGCAGCAGC   819 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0044F03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177133.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:1037   GCCGCCGACGCAGCAGCAGC   1056 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100277702), transcript variant 1, mRNA	NA	coding protein	psRNATarget
EU970136.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:843   GCCGCCGACGCAGCAGCAGC   862 Target Full Sequence	2.5	Zea mays clone 340440 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151203.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:1037   GCCGCCGACGCAGCAGCAGC   1056 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100277702), mRNA	NA	coding protein	psRNATarget
XM_008681135.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:735   GCCGCCGACGCAGCAGCAGC   754 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 53 (LOC103654303), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681134.2	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:734   GCCGCCGACGCAGCAGCAGC   753 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 53 (LOC103654303), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU956789.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   |||=|||||||||||||*|| targets:2212   GCCGCCGACGCAGCAGCAGC   2231 Target Full Sequence	2.5	Zea mays clone 1573988 protein binding protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001155741.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   *=|||||||||*|||||||| targets:89   AUCACCGACGCUGCAGCUGC   108 Target Full Sequence	2.5	Zea mays Protein SRG1 (cl945_1), mRNA	NA	coding protein	psRNATarget
BT038407.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   *=|||||||||*|||||||| targets:89   AUCACCGACGCUGCAGCUGC   108 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0231D05 mRNA, complete cds	NA	coding protein	psRNATarget
EU962470.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   *=|||||||||*|||||||| targets:101   AUCACCGACGCUGCAGCUGC   120 Target Full Sequence	2.5	Zea mays clone 242990 leucoanthocyanidin dioxygenase mRNA, complete cds	NA	coding protein	psRNATarget
EU973044.1	ncRNA:20   CGGUGGCUGCGUCGUCGACG   1   *=|||||||||*|||||||| targets:101   AUCACCGACGCUGCAGCUGC   120 Target Full Sequence	2.5	Zea mays clone 392302 mRNA sequence	NA	coding protein	psRNATarget