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BaseInfo

ncRNA ID novel_zma_miR8278
Species Zea mays
Class miRNA
Genome position Chr8:151893125-151893184 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 19
Mature sequence(if miRNA) 1 - UCGCAGACGCCAGGCAGUA - 19
Stem-loop(if miRNA) --    -      C        U   AG  G
  UCGC AGACGC AGGCAGUA GUG  UA C
  |||| |||||| |||||||| |||  ||
  AGCG UCUGCG UCUGUCGU UAC  GU C
AG    C      -        C   AU  C
Stem-loop sequence UCGCAGACGCCAGGCAGUAUGUGAGUAGCCCUGUACAUCUGCUGUCUGCGUCUCGCGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU973728.1
ncRNA:19   AUGACGGACCGCAGACGCU   1
  |||||||||||||*||||*
targets:285   UACUGCCUGGCGUGUGCGC   303

2.5 Zea mays clone 407595 mRNA sequence NA coding protein psRNATarget
XM_008654858.2
ncRNA:19   AUGACGGACCGCAGACGCU   1
  |||||||||||||*||||*
targets:369   UACUGCCUGGCGUGUGCGC   387

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (LOC103633173), mRNA NA coding protein psRNATarget