ncRNA ID | novel_zma_miR8274 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:3860297-3860397 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CGUUUUGACUUUUCUAGACA - 20 |
Stem-loop(if miRNA) |
--C      A          CAGAUAAC    GG    C               GUUUUG CUUUUCUAGA        UUUU  UAUG AUUUAGAUAUGC    |||||| ||||||||||        ||||  |||| |||||||||||A    CGAAAC GAAAAGAUCU        AAAA  AUAC UAGGUCUGUAUU UUA      C          AUAUAACA    AG    A            |
Stem-loop sequence | CGUUUUGACUUUUCUAGACAGAUAACUUUUGGUAUGCAUUUAGAUAUGCAUUAUGUCUGGAUACAUAGAAAAAACAAUAUAUCUAGAAAAGCCAAAGCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020548465.1 |
|
2.5 | PREDICTED: Zea mays histone-lysine N-methyltransferase family member SUVH2 (LOC103647308), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
EU943852.1 |
|
2.5 | Zea mays clone 1690780 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT038959.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0345G19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT035852.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0086A12 mRNA, complete cds | NA | coding protein | psRNATarget |