Search result

BaseInfo

ncRNA ID	osa-miRf10423-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GCCAGCCAGAUGGCUUGGCCAU - NA
Stem-loop(if miRNA)	-CCA  AU              U           U  GG  AG GGC    CG  UGGCUAGGCUAUUU GGCUGGCCAAA UU  CC  U |||    ||  |||||||||||||| ||||||||||| ||  ||  G CCG    GC  ACCGGUUCGGUAGA CCGACCGGUUU AG  GG  G    AUAG  CU              -           C  GA  AG
Stem-loop sequence	GGCCCACGAUUGGCUAGGCUAUUUUGGCUGGCCAAAUUUGGCCAGUGGGAGGAGGACUUUGGCCAGCCAGAUGGCUUGGCCAUCCGGAUAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK072697.1	ncRNA:22   UACCGGUUCGGUAGACCGACCG   1   *|||||*|||||||*||||||| targets:517   CUGGCCCAGCCAUCCGGCUGGC   538 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023136E04, full insert sequence	NA	coding protein	psRNATarget
XM_015769329.1	ncRNA:22   UACCGGUUCGGUAGACCGACCG   1   *|||||*|||||||*||||||| targets:609   CUGGCCCAGCCAUCCGGCUGGC   630 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group flavonol synthase/flavanone 3-hydroxylase (LOC4330843), transcript variant X1, mRNA	flavonol synthase/flavanone 3-hydroxylase(LOC4330843)	coding protein	psRNATarget
AK111599.1	ncRNA:22   UACCGGUUCGGUAGACCGACCG   1   |*||||||||||||||||*||* targets:1220   AGGGCCAAGCCAUCUGGCAGGG   1241 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013098O18, full insert sequence	NA	coding protein	psRNATarget
XM_015762845.1	ncRNA:22   UACCGGUUCGGUAGACCGACCG   1   |*||||||||||||||||*||* targets:1276   AGGGCCAAGCCAUCUGGCAGGG   1297 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group casein kinase I isoform alpha (LOC4325891), transcript variant X3, mRNA	casein kinase I isoform alpha(LOC4325891)	coding protein	psRNATarget
AK111602.1	ncRNA:22   UACCGGUUCGGUAGACCGACCG   1   |*||||||||||||||||*||* targets:2335   AGGGCCAAGCCAUCUGGCAGGG   2356 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013095J05, full insert sequence	NA	coding protein	psRNATarget