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BaseInfo

ncRNA ID	novel_zma_miR8258
Species	Zea mays
Class	miRNA
Genome position	Chr7:153178253-153178294 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	21
Mature sequence(if miRNA)	1 - AAUAGGAAGGGAUUAAAUCUC - 21
Stem-loop(if miRNA)	--          -       U   GAUUUAAUCC UUCCUAU C   |||||||||| ||||||| A   CUAAAUUAGG AAGGAUA A CU          G       A
Stem-loop sequence	GAUUUAAUCCUUCCUAUUCAAAAUAGGAAGGGAUUAAAUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT085111.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*|||||||||||||| targets:1295   GGGAUUAAAUCCCUUCCUAUU   1315 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0292J13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544263.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:1272   GAGAUUUUAUCCCUUCCUAUG   1292 Target Full Sequence	2.0	PREDICTED: Zea mays U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC100193767), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT036121.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:1263   GAGAUUUUAUCCCUUCCUAUG   1283 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0096K13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138853.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:1263   GAGAUUUUAUCCCUUCCUAUG   1283 Target Full Sequence	2.0	Zea mays U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC100193767), mRNA	NA	coding protein	psRNATarget
EU944458.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:863   GAGAUUUUAUCCCUUCCUAUG   883 Target Full Sequence	2.0	Zea mays clone 219372 mRNA sequence	NA	coding protein	psRNATarget
BT018194.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:774   GAGAUUUUAUCCCUUCCUAUG   794 Target Full Sequence	2.0	Zea mays clone EL01N0559C02.c mRNA sequence	NA	coding protein	psRNATarget
AY103598.2	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |||||||*||||||||||||* targets:669   GAGAUUUUAUCCCUUCCUAUG   689 Target Full Sequence	2.0	Zea mays PCO082792 mRNA sequence	NA	coding protein	psRNATarget
BT064784.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||||=||||| targets:825   GGGAUUAAAUCCCUUUCUAUU   845 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0132E20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157563.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||||=||||| targets:1183   GGGAUUAAAUCCCUUUCUAUU   1203 Target Full Sequence	2.5	Zea mays F-box domain containing protein (LOC100284668), mRNA	NA	coding protein	psRNATarget
EU969259.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||||=||||| targets:1183   GGGAUUAAAUCCCUUUCUAUU   1203 Target Full Sequence	2.5	Zea mays clone 327659 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552749.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||*||||||| targets:3227   GGGAUUAAAUCCCCUCCUAUU   3247 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_008670947.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||||||||*| targets:606   GGGAUUAAAUCCCUUCCUAGU   626 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
EZ093244.1	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   |=||||*||||||*||||||| targets:31   GGGAUUAAAUCCCCUCCUAUU   51 Target Full Sequence	2.5	TSA: Zea mays contig28894, mRNA sequence	NA	coding protein	psRNATarget
BT086826.2	ncRNA:21   CUCUAAAUUAGGGAAGGAUAA   1   ****||||||||||||||||* targets:70   CUUUUUUAAUCCCUUCCUAUA   90 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0020H21 mRNA, complete cds	NA	coding protein	psRNATarget