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BaseInfo

ncRNA ID	novel_zma_miR8218
Species	Zea mays
Class	miRNA
Genome position	Chr6:163860175-163860236 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - UGCCAAAGGAAAUUUGCCCC - 20
Stem-loop(if miRNA)	--     C  C           ---AU    GA   GGCAA UU UCCUUUGGCAG     GCGC  G   ||||| || |||||||||||     ||||   CCGUU AA AGGAAACCGUC     CGUG  A CC     U  -           GUCAC    UA
Stem-loop sequence	GGCAACUUCUCCUUUGGCAGAUGCGCGAGAAUGUGCCACUGCUGCCAAAGGAAAUUUGCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KT345709.1	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   |||||||||*|||||||||| targets:475   GGGGCAAAUCUCCUUUGGCA   494 Target Full Sequence	1.5	Zea mays putative PHO2 mRNA, complete cds	NA	coding protein	psRNATarget
KT345709.1	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:256   AGGGCAAAUCUCCUUUGGCA   275 Target Full Sequence	1.5	Zea mays putative PHO2 mRNA, complete cds	NA	coding protein	psRNATarget
KT345709.1	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:433   UGGGCAAAUCUCCUUUGGCA   452 Target Full Sequence	1.5	Zea mays putative PHO2 mRNA, complete cds	NA	coding protein	psRNATarget
KT345709.1	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:515   UGGGCAAAUCUCCUUUGGCA   534 Target Full Sequence	1.5	Zea mays putative PHO2 mRNA, complete cds	NA	coding protein	psRNATarget
KT345709.1	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:566   CGGGCAAAUCUCCUUUGGCA   585 Target Full Sequence	1.5	Zea mays putative PHO2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008650020.2	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   |||||||||*|||||||||| targets:1379   GGGGCAAAUCUCCUUUGGCA   1398 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 24 (LOC100502171), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650020.2	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:1160   AGGGCAAAUCUCCUUUGGCA   1179 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 24 (LOC100502171), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650020.2	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:1337   UGGGCAAAUCUCCUUUGGCA   1356 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 24 (LOC100502171), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650020.2	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:1419   UGGGCAAAUCUCCUUUGGCA   1438 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 24 (LOC100502171), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650020.2	ncRNA:20   CCCCGUUUAAAGGAAACCGU   1   *||||||||*|||||||||| targets:1470   CGGGCAAAUCUCCUUUGGCA   1489 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 24 (LOC100502171), transcript variant X1, mRNA	NA	coding protein	psRNATarget