ncRNA ID | novel_zma_miR8216 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:172425936-172425996 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AGAAGAUAGAAGUACCUGGA - 20 |
Stem-loop(if miRNA) |
--       A    -  C    AAGU   UG   AGAAGAU GAAG UA CUGG    UUC  U   ||||||| |||| || ||||    |||  C   UCUUCUA CUUC GU GACC    GAG  G CU       -    C  A    AUGU   UA |
Stem-loop sequence | AGAAGAUAGAAGUACCUGGAAGUUUCUGUCGAUGAGUGUACCAGAUGCCUUCAUCUUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU976015.1 |
|
2.5 | Zea mays clone 508722 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT060981.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0080K12 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001165810.1 |
|
2.0 | Zea mays Anaphase-promoting complex subunit 4 (LOC100304372), mRNA | NA | coding protein | psRNATarget |