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BaseInfo

ncRNA ID	novel_zma_miR8205
Species	Zea mays
Class	miRNA
Genome position	Chr6:46917145-46917240 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	21
Mature sequence(if miRNA)	76 - GGCCAUUGGAAGAACAGGAAC - 96
Stem-loop(if miRNA)	--     -UU G           CUCUUAU    U  UACGGUUGCUCGUC   GGCCA   G AAGAACAGGAA       AGCG GC              A   |||||   | |||||||||||       |||| ||              C   CUGGU   C UUCUUGUCCUU       GGAG GU              C UG     UCU G           -----UC    -  CCCAUCGACUAUCU
Stem-loop sequence	GGCCAUUGGAAGAACAGGAACUCUUAUAGCGUGCUACGGUUGCUCGUCACCUCUAUCAGCUACCCUGGAGGCUUUCCUGUUCUUGCUCUUGGUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041247.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   |*|=|||||||||||||||=| targets:9   GCUUCUGUUCUUCCAAUGGUC   29 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0005H17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543653.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   |*|=|||||||||||||||=| targets:1751   GCUUCUGUUCUUCCAAUGGUC   1771 Target Full Sequence	2.5	PREDICTED: Zea mays calmodulin binding protein (LOC100281522), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008660350.2	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   |*|=|||||||||||||||=| targets:1753   GCUUCUGUUCUUCCAAUGGUC   1773 Target Full Sequence	2.5	PREDICTED: Zea mays calmodulin binding protein (LOC100281522), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU955838.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   *||=||*|||||||||||||| targets:187   UUUUCUUUUCUUCCAAUGGCC   207 Target Full Sequence	2.0	Zea mays clone 1548273 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
AY106480.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   *||||*|||||||||||||*| targets:562   CUUCCAGUUCUUCCAAUGGAC   582 Target Full Sequence	2.5	Zea mays PCO142465 mRNA sequence	NA	coding protein	psRNATarget
EU969932.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   *||||*|||||||||||||*| targets:570   CUUCCAGUUCUUCCAAUGGAC   590 Target Full Sequence	2.5	Zea mays clone 337432 myb-like DNA-binding domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137445.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   *||||*|||||||||||||*| targets:557   CUUCCAGUUCUUCCAAUGGAC   577 Target Full Sequence	2.5	Zea mays myb-like DNA-binding domain containing protein expressed (pco142465), mRNA	NA	coding protein	psRNATarget
BT034299.1	ncRNA:21   CAAGGACAAGAAGGUUACCGG   1   *||||*|||||||||||||*| targets:557   CUUCCAGUUCUUCCAAUGGAC   577 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0129M18 mRNA, complete cds	NA	coding protein	psRNATarget