Search result

BaseInfo

ncRNA ID	novel_zma_miR8190
Species	Zea mays
Class	miRNA
Genome position	Chr10:4677488-4677604 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - CCCGUUGCUGUGGGUACAGU - 20
Stem-loop(if miRNA)	--   -   -GU      CAA  UUC AAUCCAACCCACCCUCCCCACCCCCGCUCCACCC   UGU CCC   GCAACG   GC   G                                  C   ||| |||   ||||||   ||   |                                  C   ACA GGG   CGUUGC   CG   U                                  A UG   U   UGU      --C  --U GAGGUGGCUUGGCGUGCGCUUUCGUCCUCUAGCC
Stem-loop sequence	UGUCCCGUGCAACGCAAGCUUCGAAUCCAACCCACCCUCCCCACCCCCGCUCCACCCCCACCGAUCUCCUGCUUUCGCGUGCGGUUCGGUGGAGUUGCCCGUUGCUGUGGGUACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664153.2	ncRNA:20   UGACAUGGGUGUCGUUGCCC   1   |*||*||||||||||||||* targets:738   AGUGCACCCACAGCAACGGU   757 Target Full Sequence	3.0	PREDICTED: Zea mays xylanase inhibitor protein 1 (LOC103640665), mRNA	NA	coding protein	psRNATarget
NM_001158228.1	ncRNA:20   UGACAUGGGUGUCGUUGCCC   1   |*||*||||||||||||||* targets:756   AGUGCACCCACAGCAACGGU   775 Target Full Sequence	3.0	Zea mays xylanase inhibitor protein 1 (LOC100285336), mRNA	NA	coding protein	psRNATarget
EU971917.1	ncRNA:20   UGACAUGGGUGUCGUUGCCC   1   |*||*||||||||||||||* targets:756   AGUGCACCCACAGCAACGGU   775 Target Full Sequence	3.0	Zea mays clone 372346 xylanase inhibitor protein 1 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
XM_008675560.2	ncRNA:20   UGACAUGGGUGUCGUUGCCC   1   ||*|||*||||||||||||* targets:1038   ACAGUAACCACAGCAACGGA   1057 Target Full Sequence	3.0	PREDICTED: Zea mays heavy metal-associated isoprenylated plant protein 32 (LOC103649862), mRNA	NA	coding protein	psRNATarget