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BaseInfo

ncRNA ID	osa-miRf10416-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CCUCCGUCCCAAUAUGUAGCAAC - NA
Stem-loop(if miRNA)	C                      -    AUAUGUCCAAAUUCGUAA UACUCCCU CGUCCCAAUAUGUAGCAACCUA GGAC                  U |||||||| |||||||||||||||||||||| |||| AUGAGGGA GCAGGGUUAUACAUCGUUGGAU CUAC                  C         A                      U    CUUAAUCUGGGUAGUAUC
Stem-loop sequence	UACUCCCUCCGUCCCAAUAUGUAGCAACCUAGGACAUAUGUCCAAAUUCGUAAUCCUAUGAUGGGUCUAAUUCCAUCUUAGGUUGCUACAUAUUGGGACGAAGGGAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK100614.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   |||||||=||*|||||||||||| targets:1632   GUUGCUAUAUUUUGGGACGGAGG   1654 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023108A15, full insert sequence	NA	coding protein	psRNATarget
AK099728.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||||=|||||*|||||||||||| targets:459   GUUGUUACAUUUUGGGACGGAGG   481 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013089H10, full insert sequence	NA	coding protein	psRNATarget
AK121888.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||||=|||||*|||||||||||| targets:1096   GUUGUUACAUUUUGGGACGGAGG   1118 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033105A15, full insert sequence	NA	coding protein	psRNATarget
XM_015770193.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   |||||||=||*|||||||||||| targets:1943   GUUGCUAUAUUUUGGGACGGAGG   1965 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329136 (LOC4329136), transcript variant X1, mRNA	uncharacterized LOC4329136(LOC4329136)	coding protein	psRNATarget
HI404029.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||*|||||||*|||||||||||| targets:89   GUAGCUACAUUUUGGGACGGAGG   111 Target Full Sequence	1.5	Sequence 2154 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236159.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||*|||||||*|||||||||||| targets:89   GUAGCUACAUUUUGGGACGGAGG   111 Target Full Sequence	1.5	Sequence 2154 from Patent EP2985353	NA	coding protein	psRNATarget
JB164490.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||*|||||||*|||||||||||| targets:89   GUAGCUACAUUUUGGGACGGAGG   111 Target Full Sequence	1.5	Sequence 2154 from Patent EP2559767	NA	coding protein	psRNATarget
AK243439.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *||||||=||*|||||||||||| targets:1235   AUUGCUAUAUUUUGGGACGGAGG   1257 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100068F02, full insert sequence	NA	coding protein	psRNATarget
CT832702.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *||||||=||*|||||||||||| targets:1353   AUUGCUAUAUUUUGGGACGGAGG   1375 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035G10, full insert sequence	NA	coding protein	psRNATarget
XM_015763323.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *||||||=||*|||||||||||| targets:1304   AUUGCUAUAUUUUGGGACGGAGG   1326 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 2-alkenal reductase (NADP(+)-dependent) (LOC4351814), transcript variant X1, mRNA	2-alkenal reductase (NADP(+)-dependent)(LOC4351814)	coding protein	psRNATarget
XM_015763324.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *||||||=||*|||||||||||| targets:1547   AUUGCUAUAUUUUGGGACGGAGG   1569 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 2-alkenal reductase (NADP(+)-dependent) (LOC4351814), transcript variant X2, mRNA	2-alkenal reductase (NADP(+)-dependent)(LOC4351814)	coding protein	psRNATarget
AK288842.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||*||||=||*|||||||||||| targets:1306   GUGGCUAUAUUUUGGGACGGAGG   1328 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090074J06, full insert sequence	NA	coding protein	psRNATarget
AK122047.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   ||*||||=||*|||||||||||| targets:1860   GUAGCUAUAUUUUGGGACGGAGG   1882 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033114C22, full insert sequence	NA	coding protein	psRNATarget
XM_015794712.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *|*|||||||*|||||||||||| targets:1920   AUAGCUACAUUUUGGGACGGAGG   1942 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group 4-coumarate--CoA ligase-like 3 (LOC9269113), mRNA	4-coumarate--CoA ligase-like 3(LOC9269113)	coding protein	psRNATarget
AK318575.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *|*|||||||*|||||||||||| targets:875   AUAGCUACAUUUUGGGACGGAGG   897 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090046B04, full insert sequence	NA	coding protein	psRNATarget
AK287711.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *|*||||=||*|||||||||||| targets:816   AUAGCUAUAUUUUGGGACGGAGG   838 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065133E04, full insert sequence	NA	coding protein	psRNATarget
XM_015794663.1	ncRNA:23   CAACGAUGUAUAACCCUGCCUCC   1   *|*||||=||*|||||||||||| targets:2363   AUAGCUAUAUUUUGGGACGGAGG   2385 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g02650, mitochondrial (LOC4325105), mRNA	pentatricopeptide repeat-containing protein At3g02650, mitochondrial(LOC4325105)	coding protein	psRNATarget