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BaseInfo

ncRNA ID	novel_zma_miR8180
Species	Zea mays
Class	miRNA
Genome position	Chr5:21854184-21854225 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - UCUAGUUUUGAAUCUGGACA - 20
Stem-loop(if miRNA)	--             C    C   UCUAGUUUUGAAU UGGA A   ||||||||||||| ||||   AGAUCAAAACUUG ACCU A UA             U    G
Stem-loop sequence	UCUAGUUUUGAAUCUGGACAAGUCCAUGUUCAAAACUAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543763.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:5369   UCUCCAAAUUCAAAACUAGG   5388 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382533 (LOC100382533), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020543765.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:5287   UCUCCAAAUUCAAAACUAGG   5306 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382533 (LOC100382533), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020543762.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:5282   UCUCCAAAUUCAAAACUAGG   5301 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382533 (LOC100382533), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020543764.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:5271   UCUCCAAAUUCAAAACUAGG   5290 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382533 (LOC100382533), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020543766.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:5193   UCUCCAAAUUCAAAACUAGG   5212 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100382533 (LOC100382533), transcript variant X5, mRNA	NA	coding protein	psRNATarget
AY110628.1	ncRNA:20   ACAGGUCUAAGUUUUGAUCU   1   |*||||*||||||||||||= targets:264   UCUCCAAAUUCAAAACUAGG   283 Target Full Sequence	3.0	Zea mays CL30444_1 mRNA sequence	NA	coding protein	psRNATarget