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BaseInfo

ncRNA ID novel_zma_miR8174
Species Zea mays
Class miRNA
Genome position Chr4:211229619-211229707 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 20
Mature sequence(if miRNA) 1 - AGCUAUUGUUUCAGUUACUC - 20
Stem-loop(if miRNA) --A         UC      -------UCUC   AUAAAACCAUGUCG
   GCUAUUGUU  AGUUAC           GUU              U
   |||||||||  ||||||           |||
   CGGUAACAG  UCAAUG           ACA              U
UUC         UU      UAAAACCUCUG   GCUGUCUUGCAGUC
Stem-loop sequence AGCUAUUGUUUCAGUUACUCUCGUUAUAAAACCAUGUCGUUCUGACGUUCUGUCGACAGUCUCCAAAAUGUAACUUUGACAAUGGCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ245721.1
ncRNA:20   CUCAUUGACUUUGUUAUCGA   1
  |||*|||||||||||||*||
targets:407   GAGAAACUGAAACAAUAACU   426

2.5 Zea mays clone 19848 mRNA sequence NA coding protein psRNATarget