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BaseInfo

ncRNA ID	novel_zma_miR8169
Species	Zea mays
Class	miRNA
Genome position	Chr4:179521128-179521186 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	23
Mature sequence(if miRNA)	1 - CGAACUGAACCGAAAACCUGAAU - 23
Stem-loop(if miRNA)	CGAAC        AA   UG  UA      C      UGAACCGA  ACC  AA  GACUGA A      ||||||||  |||  ||  ||||||      GCUUGGCU  UGG  UU  UUGACU A ---UA        --   GU  UC      U
Stem-loop sequence	CGAACUGAACCGAAAACCUGAAUAGACUGACAAUUCAGUUCUUUUGGGUUCGGUUCGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY110799.1	ncRNA:23   UAAGUCCAAAAGCCAAGUCAAGC   1   =*|*||||||*|||||||||||* targets:121   GAUAAGGUUUCCGGUUCAGUUCC   143 Target Full Sequence	2.5	Zea mays CL4694_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008646835.2	ncRNA:23   UAAGUCCAAAAGCCAAGUCAAGC   1   =*|*||||||*|||||||||||* targets:2961   GAUAAGGUUUCCGGUUCAGUUCC   2983 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383458 (LOC100383458), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008646830.2	ncRNA:23   UAAGUCCAAAAGCCAAGUCAAGC   1   =*|*||||||*|||||||||||* targets:3174   GAUAAGGUUUCCGGUUCAGUUCC   3196 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383458 (LOC100383458), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001176106.1	ncRNA:23   UAAGUCCAAAAGCCAAGUCAAGC   1   =*|*||||||*|||||||||||* targets:2920   GAUAAGGUUUCCGGUUCAGUUCC   2942 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383458 (LOC100383458), mRNA	NA	coding protein	psRNATarget
BT067271.1	ncRNA:23   UAAGUCCAAAAGCCAAGUCAAGC   1   =*|*||||||*|||||||||||* targets:2920   GAUAAGGUUUCCGGUUCAGUUCC   2942 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0366K17 mRNA, complete cds	NA	coding protein	psRNATarget