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BaseInfo

ncRNA ID	novel_zma_miR8167
Species	Zea mays
Class	miRNA
Genome position	Chr4:163913575-163913644 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	19
Mature sequence(if miRNA)	52 - ACAGUUGUGUAGGCUUGCU - 70
Stem-loop(if miRNA)	--    AA     U       CAAUG   -  UUGC   CAGG  UACAC AACUGUU     CUC GG    A   ||||  ||||| |||||||     ||| ||   GUUC  AUGUG UUGACAA     GAG CC    G UC    GG     -       CUUUA   A  UCAA
Stem-loop sequence	CAGGAAUACACUAACUGUUCAAUGCUCGGUUGCAGAACUCCAGAGAUUUCAACAGUUGUGUAGGCUUGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY110596.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   ||||||||||||||||||| targets:291   AGCAAGCCUACACAACUGU   309 Target Full Sequence	0.0	Zea mays CL9261_1 mRNA sequence	NA	coding protein	psRNATarget
BT039217.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:588   AUCUGGCCUACACAACUGU   606 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0001G19 mRNA, complete cds	NA	coding protein	psRNATarget
BT063028.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:674   AUCUGGCCUACACAACUGU   692 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0018D02 mRNA, complete cds	NA	coding protein	psRNATarget
BT040556.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:718   AUCUGGCCUACACAACUGU   736 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0100H16 mRNA, complete cds	NA	coding protein	psRNATarget
EU964941.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:783   AUCUGGCCUACACAACUGU   801 Target Full Sequence	3.0	Zea mays clone 282699 26S proteasome non-ATPase regulatory subunit 13 mRNA, complete cds	NA	coding protein	psRNATarget
EU961903.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:768   AUCUGGCCUACACAACUGU   786 Target Full Sequence	3.0	Zea mays clone 238965 26S proteasome non-ATPase regulatory subunit 13 mRNA, complete cds	NA	coding protein	psRNATarget
EU963587.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:760   AUCUGGCCUACACAACUGU   778 Target Full Sequence	3.0	Zea mays clone 264405 26S proteasome non-ATPase regulatory subunit 13 mRNA, complete cds	NA	coding protein	psRNATarget
BT043158.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:755   AUCUGGCCUACACAACUGU   773 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0113K13 mRNA, complete cds	NA	coding protein	psRNATarget
AY103805.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:757   AUCUGGCCUACACAACUGU   775 Target Full Sequence	3.0	Zea mays PCO119314 mRNA sequence	NA	coding protein	psRNATarget
NM_001158722.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:802   AUCUGGCCUACACAACUGU   820 Target Full Sequence	3.0	Zea mays 26S proteasome non-ATPase regulatory subunit 13 (LOC100285832), mRNA	NA	coding protein	psRNATarget
EU974195.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:802   AUCUGGCCUACACAACUGU   820 Target Full Sequence	3.0	Zea mays clone 442631 26S proteasome non-ATPase regulatory subunit 13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645621.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:766   AUCUGGCCUACACAACUGU   784 Target Full Sequence	3.0	PREDICTED: Zea mays 26S proteasome non-ATPase regulatory subunit 13 (LOC100285832), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008679115.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:796   AUCUGGCCUACACAACUGU   814 Target Full Sequence	3.0	PREDICTED: Zea mays 26S proteasome non-ATPase regulatory subunit 13 homolog A (IDP2367), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645623.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:792   AUCUGGCCUACACAACUGU   810 Target Full Sequence	3.0	PREDICTED: Zea mays 26S proteasome non-ATPase regulatory subunit 13 (LOC100285832), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU964603.1	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:804   AUCUGGCCUACACAACUGU   822 Target Full Sequence	3.0	Zea mays clone 280258 26S proteasome non-ATPase regulatory subunit 13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645622.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:827   AUCUGGCCUACACAACUGU   845 Target Full Sequence	3.0	PREDICTED: Zea mays 26S proteasome non-ATPase regulatory subunit 13 (LOC100285832), transcript variant X3, mRNA	NA	coding protein	psRNATarget
NM_001156296.2	ncRNA:19   UCGUUCGGAUGUGUUGACA   1   |*|*=|||||||||||||| targets:803   AUCUGGCCUACACAACUGU   821 Target Full Sequence	3.0	Zea mays 26S proteasome non-ATPase regulatory subunit 13 homolog A (IDP2367), mRNA	NA	coding protein	psRNATarget