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BaseInfo

ncRNA ID osa-miRf10413-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUGGUCCGUCUGCGAAAAUC - NA
Stem-loop(if miRNA)      U               C                 C        U
GUAGG AUGAUUUUUGCAGGC GACCACUUAAGCGACGU UGUGAAAA A
||||| ||||||||||||||| ||||||||||||||||| ||||||||
CGUUU UACUAAAAGCGUCUG CUGGUGAAUUCGCUGCA ACGCUUUU G
     U               C                 A        A
Stem-loop sequence GUAGGUAUGAUUUUUGCAGGCCGACCACUUAAGCGACGUCUGUGAAAAUAGAUUUUCGCAAACGUCGCUUAAGUGGUCCGUCUGCGAAAAUCAUUUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK120802.1
ncRNA:20   CUAAAAGCGUCUGCCUGGUG   1
  |||||||||||=||||||||
targets:527   GAUUUUCGCAGGCGGACCAC   546

1.5 Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence NA coding protein psRNATarget
HI403948.1
ncRNA:20   CUAAAAGCGUCUGCCUGGUG   1
  *||*|||||||=||||||||
targets:6   CAUCUUCGCAGGCGGACCAC   25

2.5 Sequence 2073 from Patent EP2074227 NA coding protein psRNATarget
JB164409.1
ncRNA:20   CUAAAAGCGUCUGCCUGGUG   1
  *||*|||||||=||||||||
targets:6   CAUCUUCGCAGGCGGACCAC   25

2.5 Sequence 2073 from Patent EP2559767 NA coding protein psRNATarget
LQ236078.1
ncRNA:20   CUAAAAGCGUCUGCCUGGUG   1
  *||*|||||||=||||||||
targets:6   CAUCUUCGCAGGCGGACCAC   25

2.5 Sequence 2073 from Patent EP2985353 NA coding protein psRNATarget