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BaseInfo

ncRNA ID novel_zma_miR8156
Species Zea mays
Class miRNA
Genome position Chr4:51237514-51237554 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 19
Mature sequence(if miRNA) 23 - CGGCGAAUCGAUCGAAGCU - 41
Stem-loop(if miRNA) CCUCCA  C   -CG     G
      UC GUC   UCGUC C
      || |||   |||||
      AG UAG   AGCGG C
--UCGA  C   CUA     C
Stem-loop sequence CCUCCAUCCGUCCGUCGUCGCCCGGCGAAUCGAUCGAAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175835.1
ncRNA:19   UCGAAGCUAGCUAAGCGGC   1
  |||*|||||||*|||||||
targets:485   AGCCUCGAUCGCUUCGCCG   503

2.5 Zea mays Protein kinase domain superfamily protein (LOC100383170), mRNA NA coding protein psRNATarget
BT066446.1
ncRNA:19   UCGAAGCUAGCUAAGCGGC   1
  |||*|||||||*|||||||
targets:485   AGCCUCGAUCGCUUCGCCG   503

2.5 Zea mays full-length cDNA clone ZM_BFc0165G15 mRNA, complete cds NA coding protein psRNATarget