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BaseInfo

ncRNA ID novel_zma_miR8154
Species Zea mays
Class miRNA
Genome position Chr4:5137580-5137626 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 20
Mature sequence(if miRNA) 28 - CGGGAGACUGGCCUUGGGCA - 47
Stem-loop(if miRNA) --       C   CC      ACC
  CGGGAGA UGG  UUGGGC   U
  ||||||| |||  ||||||
  GCCCUCU ACC  AACCCG   C
CC       A   -A      CAA
Stem-loop sequence CGGGAGACUGGCCUUGGGCACCUCAACGCCCAAACCAAUCUCCCGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008663184.2
ncRNA:20   ACGGGUUCCGGUCAGAGGGC   1
  *|||||*|||*|||||||||
targets:21   GGCCCACGGCAAGUCUCCCG   40

2.5 PREDICTED: Zea mays uncharacterized LOC100193230 (cl862_1), transcript variant X1, mRNA NA coding protein psRNATarget