ncRNA ID | novel_zma_miR8152 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:19992702-19992767 [-] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 19 |
Mature sequence(if miRNA) | 48 - UCUGGUACUUGUUUAGUCA - 66 |
Stem-loop(if miRNA) |
--UC       UG   A   AAUCA     CUU     UGGUACU  UUU GUC     AACCC   C     |||||||  ||| |||     |||||   A     ACCAUGA  AAA CAG     UUGGG   G UCGU       GU   C   -CACA     ACG |
Stem-loop sequence | UCUGGUACUUGUUUAGUCAAUCAAACCCCUUCAGGCAGGGUUACACGACCAAAUGAGUACCAUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT017459.1 |
|
3.0 | Zea mays clone EL01N0407D04.c mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_001152935.1 |
|
3.0 | Zea mays Cleavage and polyadenylation specificity factor subunit 3-I (AY109916), mRNA | NA | coding protein | psRNATarget | |||||||||
BT055290.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0124F10 mRNA, complete cds | NA | coding protein | psRNATarget |