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BaseInfo

ncRNA ID novel_zma_miR8152
Species Zea mays
Class miRNA
Genome position Chr4:19992702-19992767 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 19
Mature sequence(if miRNA) 48 - UCUGGUACUUGUUUAGUCA - 66
Stem-loop(if miRNA) --UC       UG   A   AAUCA     CUU
    UGGUACU  UUU GUC     AACCC   C
    |||||||  ||| |||     |||||   A
    ACCAUGA  AAA CAG     UUGGG   G
UCGU       GU   C   -CACA     ACG
Stem-loop sequence UCUGGUACUUGUUUAGUCAAUCAAACCCCUUCAGGCAGGGUUACACGACCAAAUGAGUACCAUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT017459.1
ncRNA:19   ACUGAUUUGUUCAUGGUCU   1
  ||=|*=|||||||||||||
targets:334   UGGCAGAACAAGUACCAGA   352

3.0 Zea mays clone EL01N0407D04.c mRNA sequence NA coding protein psRNATarget
NM_001152935.1
ncRNA:19   ACUGAUUUGUUCAUGGUCU   1
  ||=|*=|||||||||||||
targets:1482   UGGCAGAACAAGUACCAGA   1500

3.0 Zea mays Cleavage and polyadenylation specificity factor subunit 3-I (AY109916), mRNA NA coding protein psRNATarget
BT055290.1
ncRNA:19   ACUGAUUUGUUCAUGGUCU   1
  ||=|*=|||||||||||||
targets:1482   UGGCAGAACAAGUACCAGA   1500

3.0 Zea mays full-length cDNA clone ZM_BFc0124F10 mRNA, complete cds NA coding protein psRNATarget