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BaseInfo

ncRNA ID novel_zma_miR8141
Species Zea mays
Class miRNA
Genome position Chr4:175619294-175619356 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 22
Mature sequence(if miRNA) 1 - GCCAAAUUGAUCGUUUACGGUA - 22
Stem-loop(if miRNA) --   C       -   A    --UU   U  A
  CCG AGAUGAU GGU UGGC    GCU CU C
  ||| ||||||| ||| ||||    ||| ||
  GGC UUUGCUA UUA ACCG    UGG GA C
AU   A       G   A    UUUU   U  U
Stem-loop sequence CCGCAGAUGAUGGUAUGGCUUGCUUCUACCUAGUGGUUUUUGCCAAAUUGAUCGUUUACGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ052653.1
ncRNA:22   AUGGCAUUUGCUAGUUAAACCG   1
  ||||||||||||||||||||||
targets:269   UACCGUAAACGAUCAAUUUGGC   290

0.0 TSA: Zea mays contig53774, mRNA sequence NA coding protein psRNATarget