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BaseInfo

ncRNA ID	novel_zma_miR8137
Species	Zea mays
Class	miRNA
Genome position	Chr4:194556389-194556514 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	22
Mature sequence(if miRNA)	1 - UCCACCUCUAACCGAACAAGCC - 22
Stem-loop(if miRNA)	--           U  -AA     -UA     GA     A  A   A        -  -   UUA   CUUGUUCGGUU GA   GGGUU   AGGGG  UUGGA GG AUU AAUCCUCU CC UAU   A   ||||||||||| ||   |||||   |||||  ||||| || ||| |||||||| || |||   GAACAAGCCAA CU   CCUAA   UCCCC  AACUU CC UAA UUAGGGGA GG AUG   A CC           U  CCA     CUC     AC     C  C   G        A  U   UUU
Stem-loop sequence	CUUGUUCGGUUUGAAAGGGUUUAAGGGGGAUUGGAAGGAAUUAAAUCCUCUCCUAUUUAAAUUUGUAUGGAAGGGGAUUGAAUCCCCUUCAACACCCCUCUCAAUCCACCUCUAACCGAACAAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054737.1	ncRNA:22   CCGAACAAGCCAAUCUCCACCU   1   |||||||||||||||=|||||| targets:107   GGCUUGUUCGGUUAGGGGUGGA   128 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0011M02 mRNA, complete cds	NA	coding protein	psRNATarget
BT041891.1	ncRNA:22   CCGAACAAGCCAAUCUCCACCU   1   ||=|*||||||||||||||||| targets:1344   GGUUCGUUCGGUUAGAGGUGGA   1365 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0075O14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148236.1	ncRNA:22   CCGAACAAGCCAAUCUCCACCU   1   ||=|*||||||||||||||||| targets:1344   GGUUCGUUCGGUUAGAGGUGGA   1365 Target Full Sequence	1.0	Zea mays hypothetical protein (LOC100273837), mRNA	NA	coding protein	psRNATarget
EU972476.1	ncRNA:22   CCGAACAAGCCAAUCUCCACCU   1   |||||||||||||*|||||||* targets:340   GGCUUGUUCGGUUUGAGGUGGU   361 Target Full Sequence	2.5	Zea mays clone 381935 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget