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BaseInfo

ncRNA ID	ath-miRf10089-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GGUCGAGUGGUGACGUGAAGUG - NA
Stem-loop(if miRNA)	-G    AAGG G   AA G         A            G -GU   CGAGUGAAGGUGAUGUGGUGGACGUGAUGAUACU GAUC  AGUG    U AUG  G UACUCGACC CGUGGUUGAGUA U   GAU                                  C ||||  ||||    | |||  | ||||||||| |||||||||||| |   ||| CUGG  UCGU    A UGC  U GUGAGCUGG GUACCAGCUCAU G   ACC                                  G     AG    --GA G   AG G         G            G UGG   UGUUGGUGAGCUAGUGUAAUGAGCUGGGGGACCA
Stem-loop sequence	GAUCGAGUGAAGGUGAUGAAGGUACUCGACCACGUGGUUGAGUAGUGUGAUCGAGUGAAGGUGAUGUGGUGGACGUGAUGAUACUCGACCAGGGGGUCGAGUAAUGUGAUCGAGUGGUUGUCCAGGUGGUACUCGACCAUGGGGUCGAGUGGUGACGUGAAGUGCUGAGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY231407.1	ncRNA:22   GUGAAGUGCAGUGGUGAGCUGG   1   |||||||||||||||||||||| targets:523   CACUUCACGUCACCACUCGACC   544 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:22   GUGAAGUGCAGUGGUGAGCUGG   1   ||||||||*||||||||||||| targets:842   CACUUCACCUCACCACUCGACC   863 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GUGAAGUGCAGUGGUGAGCUGG   1   ||||||||*||||||||||||| targets:1138   CACUUCACCUCACCACUCGACC   1159 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF182873.1	ncRNA:22   GUGAAGUGCAGUGGUGAGCUGG   1   =*||||*|*||||||||||||| targets:434   UUCUUCUCCUCACCACUCGACC   455 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_10071 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:22   GUGAAGUGCAGUGGUGAGCUGG   1   ||||||||**|||||||||||| targets:78   CACUUCACAACACCACUCGACC   99 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget