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BaseInfo

ncRNA ID	novel_zma_miR8126
Species	Zea mays
Class	miRNA
Genome position	Chr3:232817696-232817752 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	24
Mature sequence(if miRNA)	1 - CAUCCCUGAUUUUAGGAACGGAGC - 24
Stem-loop(if miRNA)	--   C  U    -     A       CG   CAU CC GAUU UUAGG ACGGAGC  C   ||| || |||| ||||| |||||||   GUA GG CUAA GGUUU UGUCUUG  U AG   A  U    U     G       UC
Stem-loop sequence	CAUCCCUGAUUUUAGGAACGGAGCCGCUCUGUUCUGUGUUUGGUAAUCUGGAAUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542520.1	ncRNA:24   CGAGGCAAGGAUUUUAGUCCCUAC   1   |||||||||||||||||||||||| targets:1739   GCUCCGUUCCUAAAAUCAGGGAUG   1762 Target Full Sequence	0.0	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544989.1	ncRNA:24   CGAGGCAAGGAUUUUAGUCCCUAC   1   ||||||||||||=||||||||||| targets:14   GCUCCGUUCCUAGAAUCAGGGAUG   37 Target Full Sequence	1.5	PREDICTED: Zea mays RING/FYVE/PHD zinc finger superfamily protein (umc2749), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020544984.1	ncRNA:24   CGAGGCAAGGAUUUUAGUCCCUAC   1   ||||||||||||=||||||||||| targets:11   GCUCCGUUCCUAGAAUCAGGGAUG   34 Target Full Sequence	1.5	PREDICTED: Zea mays RING/FYVE/PHD zinc finger superfamily protein (umc2749), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544988.1	ncRNA:24   CGAGGCAAGGAUUUUAGUCCCUAC   1   ||||||||||||=||||||||||| targets:8   GCUCCGUUCCUAGAAUCAGGGAUG   31 Target Full Sequence	1.5	PREDICTED: Zea mays RING/FYVE/PHD zinc finger superfamily protein (umc2749), transcript variant X5, mRNA	NA	coding protein	psRNATarget
AY111305.1	ncRNA:24   CGAGGCAAGGAUUUUAGUCCCUAC   1   ||||||||=|||=||||||||||| targets:252   GCUCCGUUUCUAGAAUCAGGGAUG   275 Target Full Sequence	2.5	Zea mays CL13011_2 mRNA sequence	NA	coding protein	psRNATarget