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BaseInfo

ncRNA ID novel_zma_miR8124
Species Zea mays
Class miRNA
Genome position Chr3:223830899-223830971 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 19
Mature sequence(if miRNA) 1 - AGCCUAAUUAGUUCAUGAU - 19
Stem-loop(if miRNA) --                    U  UC   U A   U
  AGCCUAAUUAGUUCAUGAUU GC  AUA G UGC A
  |||||||||||||||||||| ||  ||| | |||
  UCGGAUUAAUUAGGUACUAA UG  UAU C AUG C
AU                    U  UU   - A   C
Stem-loop sequence AGCCUAAUUAGUUCAUGAUUUGCUCAUAUGAUGCUACCGUAACUAUUUGUUAAUCAUGGAUUAAUUAGGCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548927.1
ncRNA:19   UAGUACUUGAUUAAUCCGA   1
  |*|||||||||||||*|||
targets:1221   ACCAUGAACUAAUUAUGCU   1239

2.5 PREDICTED: Zea mays homeobox-leucine zipper protein ROC6 (LOC103646706), mRNA NA coding protein psRNATarget