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BaseInfo

ncRNA ID	novel_zma_miR8109
Species	Zea mays
Class	miRNA
Genome position	Chr3:48430812-48430861 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	20
Mature sequence(if miRNA)	1 - GAGAGGGAGGGCAGAGUCCU - 20
Stem-loop(if miRNA)	--A             A      GG    GCUCUGCCCUUCC UCUCUA  A    ||||||||||||| ||||||  U    UGAGACGGGAGGG AGAGAU  A UCC             -      AA
Stem-loop sequence	AGCUCUGCCCUUCCAUCUCUAGGAUAAAUAGAGAGGGAGGGCAGAGUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU968216.1	ncRNA:20   UCCUGAGACGGGAGGGAGAG   1   *|||=||||||||||||||= targets:248   UGGAUUCUGCCCUCCCUCUU   267 Target Full Sequence	2.0	Zea mays clone 316697 cellulase containing protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157302.1	ncRNA:20   UCCUGAGACGGGAGGGAGAG   1   *|||=||||||||||||||= targets:248   UGGAUUCUGCCCUCCCUCUU   267 Target Full Sequence	2.0	Zea mays cellulase containing protein (LOC100284407), mRNA	NA	coding protein	psRNATarget
EU943050.1	ncRNA:20   UCCUGAGACGGGAGGGAGAG   1   **||||||*||||||||||| targets:413   CAGACUCUCCCCUCCCUCUC   432 Target Full Sequence	2.5	Zea mays clone 1557034 mRNA sequence	NA	coding protein	psRNATarget