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BaseInfo

ncRNA ID novel_zma_miR8106
Species Zea mays
Class miRNA
Genome position Chr3:160132087-160132133 [-]
Reference genome RefGen_v4
Source SRR3385651;SRR3385660
Length 22
Mature sequence(if miRNA) 26 - GCCGUGGCCUGUGGGAUGCGCA - 47
Stem-loop(if miRNA) --     G  - U UG    G  C
  GCCGU GC C G  GGAU CG A
  ||||| || | |  |||| ||
  CGGCA CG G C  UCUA GC C
CU     G  C U GU    G  G
Stem-loop sequence GCCGUGGCCUGUGGGAUGCGCACGCGGAUCUUGCUGCGCGACGGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008660178.2
ncRNA:22   ACGCGUAGGGUGUCCGGUGCCG   1
  *||*|||||||||||||||*||
targets:240   AGCUCAUCCCACAGGCCACAGC   261

2.5 PREDICTED: Zea mays Stellacyanin (LOC100276923), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008660177.2
ncRNA:22   ACGCGUAGGGUGUCCGGUGCCG   1
  *||*|||||||||||||||*||
targets:233   AGCUCAUCCCACAGGCCACAGC   254

2.5 PREDICTED: Zea mays Stellacyanin (LOC100276923), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008660176.2
ncRNA:22   ACGCGUAGGGUGUCCGGUGCCG   1
  *||*|||||||||||||||*||
targets:236   AGCUCAUCCCACAGGCCACAGC   257

2.5 PREDICTED: Zea mays Stellacyanin (LOC100276923), transcript variant X1, mRNA NA coding protein psRNATarget