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BaseInfo

ncRNA ID novel_zma_miR8096
Species Zea mays
Class miRNA
Genome position Chr3:208791625-208791719 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 20
Mature sequence(if miRNA) 1 - UGAUUUUUCCUAGAAGAUUC - 20
Stem-loop(if miRNA) --       CU    U      ------U         -C    ---U    U
  AUCUUUU  GAAA AAUCAU       ACUUCAGGU  CAGU    GUUU U
  |||||||  |||| ||||||       |||||||||  ||||    ||||
  UAGAAGA  CUUU UUAGUA       UGAAGUUCG  GUCA    CGAG U
CU       UC    -      CAAUUUU         UC    UCUU    C
Stem-loop sequence AUCUUUUCUGAAAUAAUCAUUACUUCAGGUCCAGUUGUUUUUUCGAGCUUCUACUGCUGCUUGAAGUUUUUAACAUGAUUUUUCCUAGAAGAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ051360.1
ncRNA:20   CUUAGAAGAUCCUUUUUAGU   1
  *|||||*||||||||||*||
targets:187   CAAUCUACUAGGAAAAAACA   206

2.5 TSA: Zea mays contig52480, mRNA sequence NA coding protein psRNATarget