ncRNA ID | novel_zma_miR8093 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:237532046-237532154 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 25 |
Mature sequence(if miRNA) | 1 - CGGAGUAGCAAGGCACAAGUGAACA - 25 |
Stem-loop(if miRNA) |
--C         AG     A   A  -AA  U  -A    CC  CU     ACCA  G    GGAGUAGCA  GCACA GUG AC   AG GA  AGCU  AC  CAGUU    UC U    |||||||||  ||||| ||| ||   || ||  ||||  ||  |||||    ||    CCUCGUCGU  CGUGU CAC UG   UC CU  UUGA  UG  GUUAG    AG U UAC         CU     -   C  CCC  -  CG    CU  -U     --AC  C |
Stem-loop sequence | CGGAGUAGCAAGGCACAAGUGAACAAAGUGAAAGCUCCACCUCAGUUACCAUCGUUCGACAGAUUGUGUUCAGUUGCUCCUCCCGUCCACUGUGCUCUGCUGCUCCCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ062473.1 |
|
0.0 | TSA: Zea mays contig63595, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY112017.1 |
|
0.0 | Zea mays CL3093_1 mRNA sequence | NA | coding protein | psRNATarget |