ncRNA ID | novel_zma_miR8092 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:111270685-111270769 [-] |
Reference genome | RefGen_v4 |
Source | SRR1745812 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAACCGAGGAACCGAACCGAAG - 24 |
Stem-loop(if miRNA) |
--       U        -UA     --CUAU         AGU   UCGGUUC GGUUUCUU   UCUUG      UUCGGUUCU   U   ||||||| ||||||||   |||||      |||||||||   U   AGCCAAG CCAAGGAG   AGAAC      AAGCCAAGA   U GA       -        CCA     AUCUUU         AGU |
Stem-loop sequence | UCGGUUCUGGUUUCUUUAUCUUGCUAUUUCGGUUCUAGUUUUUGAAGAACCGAAUUUCUACAAGAACCGAGGAACCGAACCGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020551716.1 |
|
2.5 | PREDICTED: Zea mays Pentatricopeptide repeat-containing protein (LOC100384682), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008679479.2 |
|
2.5 | PREDICTED: Zea mays Pentatricopeptide repeat-containing protein (LOC100384682), transcript variant X1, mRNA | NA | coding protein | psRNATarget |