Search result

BaseInfo

ncRNA ID	novel_zma_miR8089
Species	Zea mays
Class	miRNA
Genome position	Chr2:14430377-14430447 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	19
Mature sequence(if miRNA)	1 - GCAAACUGUUCCACUGACA - 19
Stem-loop(if miRNA)	--    AC      A      CG   G     ACAU   GCAA  UGUUCC CUGACA  UGG CGCCG    U   ||||  |||||| ||||||  ||| |||||   CGUU  ACAAGG GACUGU  GCC GUGGC    U AA    GU      C      UU   -     AAUC
Stem-loop sequence	GCAAACUGUUCCACUGACACGUGGGCGCCGACAUUUCUAACGGUGCCGUUUGUCAGCGGAACAUGUUGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ080765.1	ncRNA:19   ACAGUCACCUUGUCAAACG   1   ||||**||||||||||||| targets:87   UGUCCUUGGAACAGUUUGC   105 Target Full Sequence	2.0	TSA: Zea mays contig16404, mRNA sequence	NA	coding protein	psRNATarget
BT069862.1	ncRNA:19   ACAGUCACCUUGUCAAACG   1   ||||**||||||||||||| targets:356   UGUCCUUGGAACAGUUUGC   374 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0306D12 mRNA, complete cds	NA	coding protein	psRNATarget
BT065998.2	ncRNA:19   ACAGUCACCUUGUCAAACG   1   ||*||||||*||||||||| targets:570   UGACAGUGGCACAGUUUGC   588 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0142C20 mRNA, complete cds	NA	coding protein	psRNATarget