ncRNA ID | novel_zma_miR8086 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:193093577-193093706 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 21 |
Mature sequence(if miRNA) | 110 - CAUUUUGGACAUGGCGGUCCA - 130 |
Stem-loop(if miRNA) |
--      AC  A      A   UGGU     -C   GA  U    --A    GG    AAUCGAAGU   GAUCGC  UG CCGAAG GUC    CUGCU  UGG  GC UUUG   CUCC  UUUG         G   ||||||  || |||||| |||    |||||  |||  || ||||   ||||  ||||         C   CUGGCG  AC GGUUUU CAG    GACGA  ACC  CG GAAC   GAGG  ACGG         C AC      GU  A      A   ----     AA   AA  C    GCG    AA    ACCGAAUGU |
Stem-loop sequence | GAUCGCACUGACCGAAGAGUCUGGUCUGCUCUGGGAGCUUUUGACUCCGGUUUGAAUCGAAGUGCCUGUAAGCCAGGCAAAGGAGGCGCAAGCGCAACCAAAAGCAGGACAUUUUGGACAUGGCGGUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU962372.1 |
|
2.5 | Zea mays clone 242143 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020547969.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100501783 (LOC100501783), transcript variant X1, mRNA | NA | coding protein | psRNATarget |