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BaseInfo

ncRNA ID novel_zma_miR8080
Species Zea mays
Class miRNA
Genome position Chr2:124655470-124655526 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 22
Mature sequence(if miRNA) 1 - UCUUAUUAGGAUUUGUUAGGGU - 22
Stem-loop(if miRNA) --                     UU UA
  UCUUAUUAGGAUUUGUUAGGG  U  U
  |||||||||||||||||||||  |  C
  AGAAUAGUCCUAAACAAUCCC  A  C
CU                     CU UA
Stem-loop sequence UCUUAUUAGGAUUUGUUAGGGUUUUAUCCAUAUCCCCUAACAAAUCCUGAUAAGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069667.1
ncRNA:22   UGGGAUUGUUUAGGAUUAUUCU   1
  |=||*||||||||||||*||||
targets:1028   AUCCCAACAAAUCCUAAGAAGA   1049

2.5 Zea mays full-length cDNA clone ZM_BFb0206D24 mRNA, complete cds NA coding protein psRNATarget
NM_001176839.1
ncRNA:22   UGGGAUUGUUUAGGAUUAUUCU   1
  |=||*||||||||||||*||||
targets:1028   AUCCCAACAAAUCCUAAGAAGA   1049

2.5 Zea mays uncharacterized LOC100384275 (LOC100384275), mRNA NA coding protein psRNATarget