ncRNA ID | novel_zma_miR8079 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:113654713-113654816 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGGGCUUGGUGAAGUCCGGUA - 21 |
Stem-loop(if miRNA) |
--    C  G   AA      UA U U  AC    G    GUCG   C      U   AGGG UU GUG  GUCCGG  A G CA  ACCG UGCU    UCA UGCCCU U   |||| || |||  ||||||  | | ||  |||| ||||    ||| ||||||   UCCC AA CAC  CAGGCU  U C GU  UGGC GCGA    AGU ACGGGA U UC    C  G   AC      GC C -  --    G    ---A   C      G |
Stem-loop sequence | AGGGCUUGGUGAAGUCCGGUAAUGUCAACACCGGUGCUGUCGUCACUGCCCUUUUGAGGGCACUGAAAGCGGCGGUUGCCUCGUCGGACCACACGAACCCCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020545461.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109942893 (LOC109942893), mRNA | NA | coding protein | psRNATarget |