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BaseInfo

ncRNA ID novel_zma_miR8079
Species Zea mays
Class miRNA
Genome position Chr2:113654713-113654816 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 21
Mature sequence(if miRNA) 1 - AGGGCUUGGUGAAGUCCGGUA - 21
Stem-loop(if miRNA) --    C  G   AA      UA U U  AC    G    GUCG   C      U
  AGGG UU GUG  GUCCGG  A G CA  ACCG UGCU    UCA UGCCCU U
  |||| || |||  ||||||  | | ||  |||| ||||    ||| ||||||
  UCCC AA CAC  CAGGCU  U C GU  UGGC GCGA    AGU ACGGGA U
UC    C  G   AC      GC C -  --    G    ---A   C      G
Stem-loop sequence AGGGCUUGGUGAAGUCCGGUAAUGUCAACACCGGUGCUGUCGUCACUGCCCUUUUGAGGGCACUGAAAGCGGCGGUUGCCUCGUCGGACCACACGAACCCCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545461.1
ncRNA:21   AUGGCCUGAAGUGGUUCGGGA   1
  |=|=|||||||=|||||||||
targets:2129   UGCUGGACUUCGCCAAGCCCU   2149

2.5 PREDICTED: Zea mays uncharacterized LOC109942893 (LOC109942893), mRNA NA coding protein psRNATarget