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BaseInfo

ncRNA ID	novel_zma_miR8074
Species	Zea mays
Class	miRNA
Genome position	Chr2:4593543-4593597 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	22
Mature sequence(if miRNA)	1 - CUCGUCUCCUCCUCCCUACCCA - 22
Stem-loop(if miRNA)	--    UC   -     -      - AAU   CUCG  UCC UCCUC CCUACC C   C   ||||  ||| ||||| |||||| |   GAGC  AGG GGGAG GGGUGG G   C GU    GA   U     C      C CUC
Stem-loop sequence	CUCGUCUCCUCCUCCCUACCCAAUCCCUCGCGGUGGGCGAGGGUGGAAGCGAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT064588.1	ncRNA:22   ACCCAUCCCUCCUCCUCUGCUC   1   |||||=|||||||||||=|||| targets:781   UGGGUGGGGAGGAGGAGGCGAG   802 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0186J03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175252.1	ncRNA:22   ACCCAUCCCUCCUCCUCUGCUC   1   |||||=|||||||||||=|||| targets:827   UGGGUGGGGAGGAGGAGGCGAG   848 Target Full Sequence	2.5	Zea mays uncharacterized LOC100382515 (LOC100382515), mRNA	NA	coding protein	psRNATarget
EU968692.1	ncRNA:22   ACCCAUCCCUCCUCCUCUGCUC   1   |||||=|||||||||||=|||| targets:827   UGGGUGGGGAGGAGGAGGCGAG   848 Target Full Sequence	2.5	Zea mays clone 323494 histone acetyltransferase HPA2 and related acetyltransferases mRNA, complete cds	NA	coding protein	psRNATarget
BT053806.1	ncRNA:22   ACCCAUCCCUCCUCCUC-UGCUC   1   **|||||||||||||||-||||| targets:332   GCGGUAGGGAGGAGGAGGACGAG   354 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0185J14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147969.1	ncRNA:22   ACCCAUCCCUCCUCCUC-UGCUC   1   **|||||||||||||||-||||| targets:380   GCGGUAGGGAGGAGGAGGACGAG   402 Target Full Sequence	3.0	Zea mays U3 snoRNP-associated protein-like EMB2271 (LOC100273551), mRNA	NA	coding protein	psRNATarget
BT041373.1	ncRNA:22   ACCCAUCCCUCCUCCUC-UGCUC   1   **|||||||||||||||-||||| targets:380   GCGGUAGGGAGGAGGAGGACGAG   402 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0068O05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150780.2	ncRNA:22   ACCCAUCCCUCCUCCUCUGCUC   1   *|||*|||||||||||||*||| targets:167   GGGGAAGGGAGGAGGAGAAGAG   188 Target Full Sequence	2.5	Zea mays TMPIT-like protein (LOC100277122), mRNA	NA	coding protein	psRNATarget
EU966870.1	ncRNA:22   ACCCAUCCCUCCUCCUCUGCUC   1   *|||*|||||||||||||*||| targets:181   GGGGAAGGGAGGAGGAGAAGAG   202 Target Full Sequence	2.5	Zea mays clone 297868 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget