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BaseInfo

ncRNA ID novel_zma_miR8072
Species Zea mays
Class miRNA
Genome position Chr2:52012963-52013047 [+]
Reference genome RefGen_v4
Source SRR3385651
Length 21
Mature sequence(if miRNA) 65 - CCAGGCUGUGGAGAUUGGGGA - 85
Stem-loop(if miRNA) --    -     U         ----UG    A      UUUUCU
  CUCG UUUCU GCGGUUUGG      UAGG CACGAC      G
  |||| ||||| |||||||||      |||| ||||||      U
  GGGU AGAGG UGUCGGACC      GUUC GUGUUG      U
AG    U     -         UUUCAA    G      UAAUAA
Stem-loop sequence CUCGUUUCUUGCGGUUUGGUGUAGGACACGACUUUUCUGUUAAUAAUGUUGUGGCUUGAACUUUCCAGGCUGUGGAGAUUGGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ058551.1
ncRNA:21   AGGGGUUAGAGGUGUCGGACC   1
  |||||||||||||||||||||
targets:36   UCCCCAAUCUCCACAGCCUGG   56

0.0 TSA: Zea mays contig59673, mRNA sequence NA coding protein psRNATarget