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BaseInfo

ncRNA ID novel_zma_miR8067
Species Zea mays
Class miRNA
Genome position Chr2:26694133-26694184 [-]
Reference genome RefGen_v4
Source SRR3385651
Length 20
Mature sequence(if miRNA) 1 - GGACGACUGGACGAGCUCCU - 20
Stem-loop(if miRNA) --      C C    GC  -  CG  U
  GAGCUC G CCAG  CG CC  CC G
  |||||| | ||||  || ||  || C
  CUCGAG C GGUC  GC GG  GG U
UC      - A    -A  A  AU  C
Stem-loop sequence GAGCUCCGCCCAGGCCGCCCGCCUGCUCGGUAGGACGACUGGACGAGCUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542264.1
ncRNA:20   UCCUCGAGCAGGUCAGCAGG   1
  =|**||||||||||||||||
targets:259   GGCUGCUCGUCCAGUCGUCC   278

3.0 PREDICTED: Zea mays dyggve-melchior-clausen syndrome protein (LOC100383666), transcript variant X1, mRNA NA coding protein psRNATarget
EU957953.1
ncRNA:20   UCCUCGAGCAGGUCAGCAGG   1
  **|=*|||||||||||||||
targets:408   CUGGCCUCGUCCAGUCGUCC   427

3.0 Zea mays clone 1638099 mRNA sequence NA coding protein psRNATarget
XM_020544449.1
ncRNA:20   UCCUCGAGCAGGUCAGCAGG   1
  **|=*|||||||||||||||
targets:508   CCGGCCUCGUCCAGUCGUCC   527

3.0 PREDICTED: Zea mays uncharacterized protein At3g28850-like (LOC109942441), mRNA NA coding protein psRNATarget