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BaseInfo

ncRNA ID	novel_zma_miR8062
Species	Zea mays
Class	miRNA
Genome position	Chr2:131242643-131242695 [-]
Reference genome	RefGen_v4
Source	SRR3385651
Length	23
Mature sequence(if miRNA)	1 - AUAUAUGUAUGUGUGUGGGUGCC - 23
Stem-loop(if miRNA)	--      G  -           AUUU   CACCUG AC UAUACAUAUAU    A   |||||| || |||||||||||   GUGGGU UG GUAUGUAUAUA    C CC      G  U           CAUA
Stem-loop sequence	CACCUGGACUAUACAUAUAUAUUUACAUACAUAUAUGUAUGUGUGUGGGUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ246040.1	ncRNA:23   CC-GUGGGUGUGUGUAUGUAUAUA   1   ||-|||*||||||||||=|||||| targets:489   GGUCACACACACACAUAUAUAUAU   512 Target Full Sequence	2.5	Zea mays clone 8663 mRNA sequence	NA	coding protein	psRNATarget
EU962030.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   *|||=*|=||||||||||||||| targets:988   UGCAUGCGCACACAUACAUAUAU   1010 Target Full Sequence	3.0	Zea mays clone 239717 homeobox-leucine zipper protein HAT22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001320548.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   *|||=*|=||||||||||||||| targets:988   UGCAUGCGCACACAUACAUAUAU   1010 Target Full Sequence	3.0	Zea mays Homeobox-leucine zipper protein HAT3 (LOC107275244), mRNA	NA	coding protein	psRNATarget
BT054580.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   *|||=*|=||||||||||||||| targets:971   UGCAUGCGCACACAUACAUAUAU   993 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0164J19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656417.2	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   **=||*||||||||||=|||||| targets:1603   AUUACACACACACAUAUAUAUAU   1625 Target Full Sequence	2.5	PREDICTED: Zea mays UDP-glycosyltransferase 74B1 (LOC100274322), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042772.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   **=||*||||||||||=|||||| targets:1126   AUUACACACACACAUAUAUAUAU   1148 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038P19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148685.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   **=||*||||||||||=|||||| targets:1126   AUUACACACACACAUAUAUAUAU   1148 Target Full Sequence	2.5	Zea mays UDP-glycosyltransferase 74B1 (LOC100274322), mRNA	NA	coding protein	psRNATarget
XM_020547182.1	ncRNA:23   CCGUGGGUGUGUGUAUGUAUAUA   1   ***||*||||||||||=|||||| targets:164   ACAACACACACACAUAUAUAUAU   186 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384090 (LOC100384090), mRNA	NA	coding protein	psRNATarget