ncRNA ID | novel_zma_miR8057 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:22822394-22822494 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385651 |
Length | 20 |
Mature sequence(if miRNA) | 82 - GUUUGGUUUGGUGAUUGAUG - 101 |
Stem-loop(if miRNA) |
--      CCU UG         U    C  CAAU  -AG      U   GUG   UCAAUU   C  AAUCGAAUU CAGU UC    CC   AAGAUU CAU   U   ||||||   |  ||||||||| |||| ||    ||   |||||| |||   U   AGUUAG   G  UUGGUUUGA GUCG AG    GG   UUUUAG GUA   U GU      --U GU         C    U  ---C  ACA      U   AUU |
Stem-loop sequence | UCAAUUCCUCUGAAUCGAAUUUCAGUCUCCAAUCCAGAAGAUUUCAUGUGUUUUUAAUGUGAUUUUACAGGCGAUGCUGCAGUUUGGUUUGGUGAUUGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ050611.1 |
|
1.5 | TSA: Zea mays contig51731, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008678213.2 |
|
3.0 | PREDICTED: Zea mays putative RAN GTPase activating family protein (LOC100191507), transcript variant X1, mRNA | NA | coding protein | psRNATarget |