ncRNA ID | osa-miRf10402-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - CUGCACCAUCCGCUUGUGGCUGUG - NA |
Stem-loop(if miRNA) |
      C   G        --   U           AGG  --AA    ---UG     - AAGGUGGCGCCUUGAGCUCA CGGCCU GCU CACCAUCC  GCU GUGGCUGUGGC   GC    GAAG     GAGGC G                    G |||||| ||| ||||||||  ||| |||||||||||   ||    ||||     ||||| |                    G GUCGGA CGG GUGGUGGG  CGG CGCCGGCGCCG   CG    CUUU     CUCGG U                    C       U   -        GA   -           --G  GCUG    GGGUU     A GGACGCCUCUACCUGAGGCU |
Stem-loop sequence | CGGCCUCGCUGCACCAUCCGCUUGUGGCUGUGGCAGGGCAAGAAGUGGAGGCGAAGGUGGCGCCUUGAGCUCAGGCUCGGAGUCCAUCUCCGCAGGUAGGCUCUUGGGUUUCGUCGGCGGCCGCGGCCGCGGCAGGGGUGGUGGGCUAGGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI404475.1 |
|
2.5 | Sequence 2600 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
LQ236605.1 |
|
2.5 | Sequence 2600 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB164936.1 |
|
2.5 | Sequence 2600 from Patent EP2559767 | NA | coding protein | psRNATarget |