ncRNA ID | novel_zma_miR8002 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:99945550-99945593 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575;SRR3385651;SRR3385660 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGUGCUCGUGCGCUACUCUCCU - 22 |
Stem-loop(if miRNA) |
--       G     UA U      CGUGCUC UGCGC  C CUCC   ||||||| |||||  | |||U   GCACGAG GCGCG  G GAGC GG       -     GC C    |
Stem-loop sequence | CGUGCUCGUGCGCUACUCUCCUCGAGCGCGGCGCGGAGCACGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001138032.1 |
|
3.0 | Zea mays Protein NRT1/ PTR FAMILY 5.2 (LOC100192842), mRNA | NA | coding protein | psRNATarget | |||||||||
BT034936.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0029C01 mRNA, complete cds | NA | coding protein | psRNATarget |