ncRNA ID | novel_zma_miR8001 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:272716602-272716782 [+] |
Reference genome | RefGen_v4 |
Source | SRR1745812 |
Length | 21 |
Mature sequence(if miRNA) | 161 - CAUGUAGGAAAAGUUGGCGCC - 181 |
Stem-loop(if miRNA) |
--                                      C                                     CUU  CGGUGGGG   CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUC CAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCC   GA        U   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||        C   GCGGUUGAAAAGGAUGUACCGUCGGCUAUACCGUUCAG GUCCCCCAGCCGCGGUAUCUAGAACCGCGGCUGGGGG   CC        C CC                                      A                                     --A  UAUCGUGG |
Stem-loop sequence | CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUCCCAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCCCUUGACGGUGGGGUCCGGUGCUAUCCAGGGGGUCGGCGCCAAGAUCUAUGGCGCCGACCCCCUGAGACUUGCCAUAUCGGCUGCCAUGUAGGAAAAGUUGGCGCC |