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BaseInfo

ncRNA ID novel_zma_miR7999
Species Zea mays
Class miRNA
Genome position Chr1:11985675-11985718 [-]
Reference genome RefGen_v4
Source SRR3385575;SRR3385651;SRR3385660
Length 20
Mature sequence(if miRNA) 1 - GAUCCCUAUAGAAUUCUGUG - 20
Stem-loop(if miRNA) --        C   CUC    U
  CAGAAUUC AUA   GAUC C
  |||||||| |||   |||| A
  GUCUUAAG UAU   CUAG U
GU        A   -CC    A
Stem-loop sequence CAGAAUUCCAUACUCGAUCUCAUAGAUCCCUAUAGAAUUCUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ108476.1
ncRNA:20   GUGUCUUAAGAUAUCCCUAG   1
  ||||||||||||||||||||
targets:77   CACAGAAUUCUAUAGGGAUC   96

0.0 TSA: Zea mays contig44135, mRNA sequence NA coding protein psRNATarget